Field Of Life Sciences Research Articles

High‐Resolution 3D Printing of Dual‐Curing Thiol‐Ene/Epoxy System for Fabrication of Microfluidic Devices for Bioassays

AbstractThe customized processing of polymer materials in the microscale by high‐resolution 3D printing provides an easy access to advanced applications in the fields of optics, microfluidics, tissue engineering, and life science. However, the 3D printing of enclosed structures in the scale of tens of microns such as closed microfluidic channels remains a challenge as channel structures often are clogged by residual cured resin. Dual‐curing systems based on off‐stoichiometric thiol‐ene and thiol‐ene/epoxy chemistry are well‐known for adhesive‐free bonding in the fabrication of cast or injection molded microfluidic devices. Herein, the first high‐resolution stereolithography 3D printing of a dual‐curing thiol‐ene/epoxy system in the microscale for the fabrication of customized microfluidic devices is presented. In the first curing step, by high‐resolution 3D printing open microfluidic structures are produced. Consecutively, the microchannels are sealed by adhesive‐free dry bonding upon thermal initiation, producing well‐controlled structures with channel sizes down to 80 µm. Before bonding, the intermediate material allows for tailored surface modification with biotin, which allows for consecutive immobilization of various biomolecules. A DNA‐bioassay with specific patterning is shown in the sealed chip. The presented work paves the way toward the fabrication of customized microfluidic devices for a large range of specific bioassays.

Rethinking 13C-Metabolic flux analysis – The bayesian way of flux inference

Metabolic reaction rates (fluxes) play a crucial role in comprehending cellular phenotypes and are essential in areas such as metabolic engineering, biotechnology, and biomedical research. The state-of-the-art technique for estimating fluxes is metabolic flux analysis using isotopic labelling (13C-MFA), which uses a dataset-model combination to determine the fluxes. Bayesian statistical methods are gaining popularity in the field of life sciences, but the use of 13C-MFA is still dominated by conventional best-fit approaches. The slow take-up of Bayesian approaches is, at least partly, due to the unfamiliarity of Bayesian methods to metabolic engineering researchers. To address this unfamiliarity, we here outline similarities and differences between the two approaches and highlight particular advantages of the Bayesian way of flux analysis. With a real-life example, re-analysing a moderately informative labelling dataset of E. coli, we identify situations in which Bayesian methods are advantageous and more informative, pointing to potential pitfalls of current 13C-MFA evaluation approaches. We propose the use of Bayesian model averaging (BMA) for flux inference as a means of overcoming the problem of model uncertainty through its tendency to assign low probabilities to both, models that are unsupported by data, and models that are overly complex. In this capacity, BMA resembles a tempered Ockham's razor. With the tempered razor as a guide, BMA-based 13C-MFA alleviates the problem of model selection uncertainty and is thereby capable of becoming a game changer for metabolic engineering by uncovering new insights and inspiring novel approaches.

GO@ZnO/CuO sensitive selective detection of lactic acid photoelectrochemistry design of sensors

The photoelectrochemical lactate sensor is a sensor that integrates electrochemical and optoelectronic principles for detecting lactate concentration. Lactic acid is a metabolic product in organisms, and its concentration changes are closely related to the health status of the body. The development of highly sensitive and selective lactic acid sensors is of great significance for fields such as medical diagnosis, exercise physiology, and the food industry. This study used a simple hydrothermal method to prepare CuO and ZnO composite electrodes, with GO flake structures covering the surface of nanoparticles, providing a larger surface area and enhanced interaction. Advanced nanomaterials were used as the working electrode materials for electrochemical sensors, which generate current signals through specific reactions with lactic acid to enhance the sensitivity and stability of the sensors. The limit of detection (LOD) is 0.203 mM. Efficient monitoring of lactate concentration provides a novel and multifunctional method, which is of great significance for promoting research in the fields of medicine and life sciences.

The policy is dead, long live the policy—Revealing science, technology, and innovation policy priorities and government transitions via network analysis

Abstract Each government has priorities for science, technology, and innovation policies (STIP). How can we identify the changing or reinforced STIP research priorities induced by government transitions? This study aims to unveil the STIP changing structure in the public funding research call contents in Colombia from 2007 to 2022, applying a co-word and network analysis approach to 389 funding research calls. We showed each government’s changing distribution of the betweenness centrality of 334 fields from Health, Life, Physical, and Social Sciences. We found that STIP priorities are getting denser and more diverse in terms of research fields. Despite this complexity, just 14 fields of Life, Physical, and Social Sciences, such as drug discovery, general business, management & accounting, and nature and landscape conservation, maintained their higher strategic relevance despite the government in office. This study maps the short and long-term focus of STIP regardless of the changing political tide inherent in democratic countries.

Dispersion Control over Molecule Cohesion: Exploiting and Dissecting the Tipping Power of Aromatic Rings.

ConspectusWe have learned over the past years how London dispersion forces can be effectively used to influence or even qualitatively tip the structure of aggregates and the conformation of single molecules. This happens despite the fact that single dispersion contacts are much weaker than competing polar forces. It is a classical case of strength by numbers, with the importance of London dispersion forces scaling with the system size. Knowledge about the tipping points, however difficult to attain, is necessary for a rational design of intermolecular forces. One requires a careful assessment of the competing interactions, either by sensitive spectroscopic techniques for the study of the isolated molecules and aggregates or by theoretical approaches. Of particular interest are the systems close to the tipping point, when dispersion interactions barely outweigh or approach the strength of the other interactions. Such subtle cases are important milestones for a scale-up to realistic multi-interaction situations encountered in the fields of life and materials science. In searching for examples that provide ideal competing interactions in complexes and small clusters, aromatic systems can offer a diverse set of molecules with a variation of dispersion and electrostatic forces that control the dominant and peripheral interactions. Our combined spectroscopic and theoretical investigations provide valuable insights into the balance of intermolecular forces because they typically allow us to switch the aromatic substituent on and off. High-resolution rotational spectroscopy serves as a benchmark for molecular structures, as correct calculations should be based on correct geometries. When discussing the competition with other noncovalent interactions, obvious competitors are directional hydrogen bonds. As a second counterweight to aryl interactions, we will discuss aurophilic/metallophilic interactions, which also have a strong stabilization with a small number of atoms involved. Vibrational spectroscopy is most sensitive to interactions of light atoms, and the competition of OH hydrogen bonds with dispersion forces in a molecular aggregate can be judged well by the OH stretching frequency. Experiments in the gas phase are ideal for gauging the accuracy of quantum chemical predictions free of solvent forces. A tight collaboration utilizing these three methods allows experiment vs experiment vs theory benchmarking of the overall influence of dispersion in molecular structures and energetics.

Palladium Catalyzed Carbonyl Amination of Fluorinated Olefins for Synthesis of α‐CF3‐Acrylamides

AbstractAcrylamides are a class of important organic compounds that play key roles in biomedical chemistry, materials science, life science, and other fields. Due to the strong electron‐withdrawing effect of trifluoromethyl, the synthesis of trifluoromethylated acrylamides, especially those containing double bonds, has long been a challenge. Here, we report an example of the formation of trifluoromethyl acrylamides through palladium catalyzedcarbonylation of fluorinated olefins. By optimizing the reaction conditions, we can obtain different amide compounds, including alkyl acrylamides. aromatic acrylamides and heterocyclic acrylamides. This method has good substrate adaptability and functional group tolerance,so it is expected to be used in the synthesis of key amides in the fields of medicine and other fields.

Preface: 3rd International Conference on Biotechnology, Life Science and Medical Engineering (BLSME 2024)

This conference proceedings volume contains the written versions of the contributions presented during the 2024 3rd International Conference on Biotechnology, Life Science and Medical Engineering (BLSME 2024), it had been held in Jeju, South Korea during January 13-14, 2024. This conference is the premier forum for the presentation of new advances and research results in the fields of biotechnology, bioengineering, biochemistry, preclinical medicine, clinical medicine, pharmacology, life science, medical engineering, and medicine technology.
 The conference provided a forum for discussion and sharing between lecturers, researchers, academics, practitioners, communities, and specialists, from universities, research institutes, corporations, industries, the government, and the public. The conference has been a great opportunity for participants coming from many countries to present and discuss topics in their respective research areas.
 BLSME 2024 conference included 4 plenary sessions and invited speakers, and oral and poster presentations to allow as many as possible attendances to present their scientific results on the different fields. The manuscripts which have presented were published under the peer-reviewed process.
 We would love to express our gratitude for all the participants, keynote speakers, and guests of honor, for their effective contribution in our conference. Our ongoing thankfulness is presented for our guest editors and speakers. Finally, we would love to express our gratefulness for all our sponsors, partners, and colleagues, we hope to collaborate with them in future activities.
 Chairman of Conference Committee
 Jeju, South Korea

GENETIC ARCHIVES AND LIFELINE: UNRAVELING THE UMBILICAL CORD’S BIOLOGICAL DATABASE

Biological databases are critical components of the field of bioinformatics, which is dedicated to managing, organising, and making sense of the vast and diverse biological data generated by scientific research. These databases play a fundamental role in modern life sciences, allowing researchers, clinicians, and scientists to access, analyse, and interpret a wide range of biological information. These databases serve as invaluable resources, enabling researchers to access, manage, and analyse biological data, accelerating scientific discoveries and enhancing our understanding of life's complexities. There are various types of biological databases that serve as critical resources for researchers and scientists in the field of life sciences. These databases are categorised based on the types of biological data they store and manage. Keywords: Bioinformatics, biological database, genetics, scientific research, genomics, medical advancements, data repositories

A Phase Model of the Bio-Inspired NbOx Local Active Memristor under Weak Coupling Conditions.

For some so-called computationally difficult problems, using the method of Boolean logic is fundamentally inefficient. For example, the vertex coloring problem looks very simple, but the number of possible solutions increases sharply with the increase of graph vertices. This is the difficulty of the problem. This complexity has been widely studied because of its wide applications in the fields of data science, life science, social science, and engineering technology. Consequently, it has inspired the use of alternative and more effective non-Boolean methods for obtaining solutions to similar problems. In this paper, we explore the research on a new generation of computers that use local active memristors coupling. First, we study the dynamics of the memristor coupling network. Then, the simplified system phase model is obtained. This research not only clarifies a physics-based calculation method but also provides a foundation for the construction of customized analog computers to effectively solve NP-hard problems.

Anthraquinone-metal complex fluorescence sensing platform for monitoring PPi mediated by Al3+ and bioimaging

Anions are widely found in humans and the environment. The analysis of its content and distribution shows great potential in the fields of life science, environmental science and biochemical reactions. Herein, a new anthraquinone derivative appended fluorescent probe (HBD) was developed as a reversible fluorescent probe for the detection pyrophosphate (PPi) in methanol/urotropine buffer medium (1:1, v/v, pH 4.5). The probe displayed fluorescence “turn-on” response towards Al3+ with high specificity. Due to the cleaving of the -CN bond and subsequent creation of complex caused by coordination with Al3+, the chelation-enhanced fluorescence (CHEF) effect was activated, resulting in a significantly enhancement fluorescence response. Further, 1H NMR titration and HRMS analysis revealed that the Al3+ induced hydrolysis occurs on one side of the Schiff base and led to the formation of free primary amine compound. Moreover, the binding mechanism was also recognized density functional theory (DFT) studies. Due to the strong binding ability of PPi and Al3+, PPi could remove Al3+ from the complex, causing fluorescence quenching. The specific determination of Al3+ and PPi with the detecting limit of 31.6 nM and 56.8 nM. Due to its good biocompatibility, the sensor was successfully applied to fluorescence imaging of Al3+ and PPi in HeLa cells and zebrafish. The results show that HBD has broad application prospects in environmental and biological analysis.

[Creating a place for open innovation among diverse players - a perspective from practitioners at a science park].

Twenty years after the concept of open innovation was first proposed, entrepreneurship and horizontal division of labor have become popular in Japan, following the global trend. However, in the life science field, the foundation for open innovation is still in its infancy due to the high degree of specialization, large scale of required investment, and low probability of success. For the five years since its opening in 2018, Shonan Health Innovation Park (Shonan iPark) has taken on the challenge of building an ecosystem to create a place where a diverse range of players can realize open innovation. The key points of the efforts are the multifaceted approach taken by the governing body, which is well versed in life sciences, and on the other hand, the fostering of a mutually supportive mechanism and culture by actively borrowing the strength of the community's constituent members. In this article, we introduce the efforts to support diverse players, including venture companies, from the perspective of a science park that creates a place for open innovation.

Comparison of the SMLM technique and the MSSR algorithm in confocal microscopy for super-resolved imaging of cellulose fibres.

Nowadays, the use of super-resolution microscopy (SRM) is increasing globally due to its potential application in several fields of life sciences. However, a detailed and comprehensive guide is necessary for understanding a single-frame image's resolution limit. This study was performed to provide information about the structural organisation of isolated cellulose fibres from garlic and agave wastes through fluorophore-based techniques and image analysis algorithms. Confocal microscopy provided overall information on the cellulose fibres' microstructure, while techniques such as total internal reflection fluorescence microscopy facilitated the study of the plant fibres' surface structures at a sub-micrometric scale. Furthermore, SIM and single-molecule localisation microscopy (SMLM) using the PALM reconstruction wizard can resolve the network of cellulose fibres at the nanometric level. In contrast, the mean shift super-resolution (MSSR) algorithm successfully determined nanometric structures from confocal microscopy images. Atomic force microscopy was used as a microscopy technique for measuring the size of the fibres. Similar fibre sizes to those evaluated with SIM and SMLM were found using the MSSR algorithm and AFM. However, the MSSR algorithm must be cautiously applied because the selection of thresholding parameters still depends on human visual perception. Therefore, this contribution provides a comparative study of SRM techniques and MSSR algorithm using cellulose fibres as reference material to evaluate the performance of a mathematical algorithm for image processing of bioimages at a nanometric scale. In addition, this work could act as a simple guide for improving the lateral resolution of single-frame fluorescence bioimages when SRM facilities are unavailable.

How are cell and tissue structure and function influenced by gravity and what are the gravity perception mechanisms?

Progress in mechanobiology allowed us to better understand the important role of mechanical forces in the regulation of biological processes. Space research in the field of life sciences clearly showed that gravity plays a crucial role in biological processes. The space environment offers the unique opportunity to carry out experiments without gravity, helping us not only to understand the effects of gravitational alterations on biological systems but also the mechanisms underlying mechanoperception and cell/tissue response to mechanical and gravitational stresses. Despite the progress made so far, for future space exploration programs it is necessary to increase our knowledge on the mechanotransduction processes as well as on the molecular mechanisms underlying microgravity-induced cell and tissue alterations. This white paper reports the suggestions and recommendations of the SciSpacE Science Community for the elaboration of the section of the European Space Agency roadmap “Biology in Space and Analogue Environments” focusing on “How are cells and tissues influenced by gravity and what are the gravity perception mechanisms?” The knowledge gaps that prevent the Science Community from fully answering this question and the activities proposed to fill them are discussed.

Energy Migration Layer Modulated Lanthanide Luminescent Nanoparticles Toward Multimode Ratio Fluorescence Thermometers

AbstractFluorescent temperature sensing is considered as a research hotspot in the fields of life sciences and medicine. Despite the existence of numerous materials, the low sensitivity still limits their broader application. Herein, a core‐shell‐shell structure of lanthanide‐doped nanoparticles is designed, which can adjust the energy transfer process by controlling the Yb3+ concentration in the energy migration layer, so as to generate different but regular visible upconversion and near‐infrared downshifting emission modes depending on 808 or 980 nm excitation wavelengths. And the energy migration, cross relaxation, and energy cycling processes involved in energy migration ions are analyzed and summarized. Subsequently, unlike traditional thermal coupled fluorescence thermometers, the visible and near‐infrared emission under different excitations is selected as the fluorescence intensity ratio by combining both thermal quenching and enhancement. Thus, a new type of fluorescence thermometer with deep penetration capability and high sensitivity within the biological temperature range is obtained, which can inspire a new design strategy for the future biosensing field.

Merging of Bi-Modality of Ultrafast Laser Processing: Heating of Si/Au Nanocomposite Solutions with Controlled Chemical Content.

Ultrafast laser processing possesses unique outlooks for the synthesis of novel nanoarchitectures and their further applications in the field of life science. It allows not only the formation of multi-element nanostructures with tuneable performance but also provides various non-invasive laser-stimulated modalities. In this work, we employed ultrafast laser processing for the manufacturing of silicon-gold nanocomposites (Si/Au NCs) with the Au mass fraction variable from 15% (0.5 min ablation time) to 79% (10 min) which increased their plasmonic efficiency by six times and narrowed the bandgap from 1.55 eV to 1.23 eV. These nanostructures demonstrated a considerable fs laser-stimulated hyperthermia with a Au-dependent heating efficiency (~10-20 °C). The prepared surfactant-free colloidal solutions showed good chemical stability with a decrease (i) of zeta (ξ) potential (from -46 mV to -30 mV) and (ii) of the hydrodynamic size of the nanoparticles (from 104 nm to 52 nm) due to the increase in the laser ablation time from 0.5 min to 10 min. The electrical conductivity of NCs revealed a minimum value (~1.53 µS/cm) at 2 min ablation time while their increasing concentration was saturated (~1012 NPs/mL) at 7 min ablation duration. The formed NCs demonstrated a polycrystalline Au nature regardless of the laser ablation time accompanied with the coexistence of oxidized Au and oxidized Si as well as gold silicide phases at a shorter laser ablation time (<1 min) and the formation of a pristine Au at a longer irradiation. Our findings demonstrate the merged employment of ultrafast laser processing for the design of multi-element NCs with tuneable properties reveal efficient composition-sensitive photo-thermal therapy modality.

Molecular interaction studies of P3CL on bovine serum albumin through biophysical approach

In the fields of pharmacology and life sciences, it is essential to study how prescribed drugs interact with carrier proteins in human serum albumin. The current study has evaluated the binding properties of rhodanine derivative; (z)-2-(4-(5-((3-(3-chlorophenyl)-1-phenyl-1H-pyrazol-4-oxo-2-thioxothiazolidin-3-yl)benzamido)acetic acid (P3CL) on bovine serum albumin (BSA) by biophysical approach. BSA is a homology model of Human serum albumin. Due to the cost-effectiveness of Human Serum Albumin (HSA) we have studied the binding properties of rhodanine derivative (P3CL) on BSA. The BSA–P3CL interactions were investigated by fluorescence spectroscopy and revealed the presence of a static quenching mechanism. P3CL possesses good binding affinity on BSA with binding constant KP3CL = 5.36330 × 1013 M−1 binding free energy. We have calculated the binding free energy, the number of binding sites, and the binding constants. The establishment of hydrogen bonds and the active participation of amino acids in drug binding were confirmed by molecular docking studies. As conventional processes for the investigation of pharmacological drugs, therapeutic combinations, and coordinated drug intake, the offered strategies are simple to comprehend, accurate, and rapid to put into practice. Our findings will support an additional investigation into ligand’s pharmacological activity. Communicated by Ramaswamy H. Sarma

Mapping the Nordic Research Landscape for the period 2016-2020: a comprehensive study of research outcomes, collaborations, and impact

Background This article aims to study the research outcomes of five Nordic countries in terms of research publications, spend on R&amp;D, outcomes and collaborations as these are important parameters to understand research thrust of the countries/regions, in addition to their innovation capability. Methods The research outcomes of the Nordic countries in terms of the total number of publications, coauthored publications, publications with corporate collaborators, citations, the Field Weighted Citation Index (FWCI) and publications in different subject areas were retrieved using Scopus and its associate SciVal. The research outcomes were extracted for five years from 2016-2020. In addition, total population, researcher population and research spend of these countries have been obtained from World Bank data available for the year 2021. Results The analysis showed that Sweden has the highest population and the highest number of researchers in this region. All countries have the highest number of coauthored publications with the United States, followed by the United Kingdom, except Iceland, which has the second highest number of coauthored publications with Sweden. Denmark, followed by Iceland, stands prominent with reference to having publications with corporate collaborations. Denmark and Sweden have a high percentage of articles in first quartile journals, which is above the average for Nordic countries. Iceland stands at the top with the highest citations, which is depicted by high FWCI. Across subject areas, the Nordic countries have maximum publications in life sciences. Other prominent subject areas include technology and natural sciences. Conclusion On analysing the research landscape of Nordic countries, maximum research output is in the field of life sciences and medicine, and most of the coauthored publications of these countries are with the United States. Denmark, with its exemplary research output, excels with maximum papers in top quartile journals and with maximum corporate collaborations and the highest FWCI.

Rational Design and Biological Application of Hybrid Fluorophores.

Fluorophores are considered powerful tools for not only enabling the visualization of cell structures, substructures, and biological processes, but also making for the quantitative and qualitative measurement of various analytes in living systems. However, most fluorophores do not meet the diverse requirements for biological applications in terms of their photophysical and biological properties. Hybridization is an important strategy in molecular engineering that provides fluorophores with complementarity and multifunctionality. This review summarizes the basic strategies of hybridization with four classes of fluorophores, including xanthene, cyanine, coumarin, and BODIPY with a focus on their structure-property relationship (SPR) and biological applications. This review aims to provide rational hybrid ideas for expanding the reservoir of knowledge regarding fluorophores and promoting the development of newly produced fluorophores for applications in the field of life sciences.

Single-image phase retrieval for off-the-shelf Zernike phase-contrast microscopes.

Quantitative phase imaging (QPI), such as digital holography, is considered a promising tool in the field of life science due to its noninvasive and quantitative visualization capabilities without the need for fluorescence labeling. However, the popularity of QPI systems is limited due to the cost and complexity of their hardware. In contrast, Zernike phase-contrast microscopy (ZPM) has been widely used in practical scenarios but has not been categorized as QPI, owing to halo and shade-off artifacts and the weak phase condition. Here, we present a single-image phase retrieval method for ZPM that addresses these issues without requiring hardware modifications. By employing a rigorous physical model of ZPM and a gradient descent algorithm for its inversion, we achieve single-shot QPI with an off-the-shelf ZPM system. Our approach is validated in simulations and experiments, demonstrating QPI of a polymer microbead and biological cells. The quantitative nature of our method for single-cell imaging is confirmed through comparisons with observations from an established QPI technique conducted through digital holography. This study paves the way for transforming non-QPI ZPM systems into QPI systems.

Quenching Reaction-Diffusion Systems in Bioengineering and Life Sciences

This research paper revolves around investigating the phenomenon of quenching in reaction-diffusion systems and highlighting its significance. The primary focus is on analyzing a specific type of parabolic singular reaction-diffusion model that incorporates positive Dirichlet boundary conditions. The objective is to establish the sufficiency of certain conditions for quenching to occur within a finite time frame and to demonstrate the global existence of solutions. The novelty of this paper lies in the simplicity of the conditions imposed on the nonlinearity. This simplicity allows us to choose it from a wide range of possibilities, thus facilitating the application of the model to numerous singular reaction-diffusion phenomena. To bolster our findings, we will present various real-world applications in the fields of bioengineering and life sciences, showcasing the practical relevance of quenching phenomena. Finally, the paper ends with a conclusion and some potential future perspectives for further research in this area.